Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs56277061 chr13:46965406 T/G 6.35E-7 289 25.02 30.2 23.23 KM Plot
KIRP rs56278044 chr3:122760686 A/C 4.28E-8 286 26.38 25.63 13.97 KM Plot
KIRP rs56350395 chr2:238507679 A/G 0.000176 284 25.82 25.23 12.1 KM Plot
KIRP rs56371550 chr1:231147805 G/T 5.18E-5 278 25.02 29.5 10.97 KM Plot
KIRP rs56394318 chr13:46975199 C/T 6.35E-7 289 25.02 30.2 23.23 KM Plot
KIRP rs56397647 chr19:19642795 C/T 5.72E-5 287 25.5 26.4 8.98 KM Plot
KIRP rs56399780 chr21:46265500 T/C 2.46E-5 276 26.4 25.18 21.48 KM Plot
KIRP rs56405707 chr6:27640246 G/A 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs56834034 chr16:990800 T/A 0.0002 289 26.8 22.8 12.82 KM Plot
KIRP rs56888503 chr3:125806266 G/A 6.36E-5 285 26.58 22.37 10.08 KM Plot
KIRP rs57012996 chr11:47194924 T/G 4.98E-6 288 25.57 29.8 12.63 KM Plot
KIRP rs57173149 chr4:5539103 G/T 4.69E-5 283 25.7 26.37 12.93 KM Plot
KIRP rs57187724 chr6:169269576 C/A 1.27E-6 284 25.37 26.4 6.7 KM Plot
KIRP rs57398061 chr6:148678331 C/A 5.5E-6 285 26.4 19.63 17.13 KM Plot
KIRP rs5753700 chr22:31971258 C/T 8.17E-5 289 25.67 27.33 2.07 KM Plot